#include <types.h>
Data Fields | |
char * | name_ref |
int | index_ref |
char * | name_query |
int | index_query |
float | identity |
int | al_length |
int | nb_mismatches |
int | nb_gaps_open |
int | pos_start_ref |
int | pos_end_ref |
int | pos_start_query |
int | pos_end_query |
float | evalue |
float | bit_score |
char | strand_ref |
char | strand_query |
That structure will implement a structure that will contain all information about an alignment extracted from the alignment files
Name of the reference sequence
Index of the reference sequence in the sequence array
Name of the query sequence
Index of the query sequence in the sequence array
Identity of the alignment
Length of the alignment
Number of mismatches
Number of gap openings
Starting position of match in the ref sequence
Starting position of match in the ref sequence
Starting position of match in the query sequence
Starting position of match in the query sequence
float alignment_info_s::evalue |
Evalue of the alignment
Bit score of the alignment
Strand of the alignment on the ref
Strand of the alignment on the query