File List
Here is a list of all documented files with brief descriptions:
src/alignment.c | File that defines all functions related to alignments |
src/alignment.h | Header file that defines all functions related to alignments |
src/aln_matrices.c | File that contains functions for the mangement of matrices |
src/aln_matrices.h | Header file for the management of matrices used in comparison |
src/blast_interface.h | Header file for the interface between the Flex/Bison parser and this software |
src/buffer.h | Header file for the management of buffers |
src/carnac.h | File tha contains functions for the carnac mangement |
src/io.c | File that defines the IN/OUT definitions and functions |
src/io.h | Header file that defines the IN/OUT definitions and functions |
src/macros.h | Header file that defines all macros definitions |
src/main.c | File that defines the main software function |
src/matt_ygraph.c | File that all functions used to retrieve conserved regions and select some |
src/matt_ygraph.h | Header file that contains all functions used to retrieve conserved regions and select some |
src/options.c | File that defines the software options |
src/options.h | Header file that defines the software options |
src/sequence.c | File that defines all functions related to sequences |
src/sequence.h | Header file that defines all functions related to sequences |
src/sequence_interface.h | Header file for the interface between the Flex/Bison parser and this software |
src/types.h | Header file that defines all structures used in this software |