Main Page
Data Structures
Files
Data Structures
Data Fields
All
Variables
a
b
c
d
e
f
i
l
m
n
p
q
r
s
t
Here is a list of all documented struct and union fields with links to the struct/union documentation for each field:
- a -
al_info :
alignment_info_array
al_length :
alignment_info_s
array_of_al_info :
matt_ygraph_s
array_of_scores :
matt_ygraph_s
array_of_seqs :
matt_ygraph_s
- b -
bases :
sequence_s
bit_score :
alignment_info_s
- c -
chars :
char_array
clique_index :
clique_s
clique_set :
set_of_seqs_s
- d -
data :
sequence_buffer_s
- e -
evalue :
alignment_info_s
- f -
from :
sequence_s
- i -
id_ref :
interval_query_s
identity :
alignment_info_s
index :
interval_query_s
index_query :
alignment_info_s
index_ref :
alignment_info_s
indexes :
neighbor_s
interesting_regions :
matt_ygraph_s
intervals :
interval_array
- l -
length :
sequence_s
,
score_array
- m -
max_size :
sequence_buffer_s
mean_al :
score_array
- n -
name :
sequence_s
name_query :
alignment_info_s
name_ref :
alignment_info_s
nb_al_info :
alignment_info_array
nb_chars :
char_array
nb_gaps_open :
alignment_info_s
nb_intervals :
interval_array
nb_mismatches :
alignment_info_s
nb_neighbors :
neighbor_s
nb_q_intervals :
set_of_seqs_s
nb_seqs :
sequence_array
nb_seqs_clique :
clique_s
neighbors :
set_of_seqs_s
- p -
pos_end :
interval_s
,
interval_query_s
pos_end_query :
alignment_info_s
pos_end_ref :
alignment_info_s
pos_start :
interval_s
,
interval_query_s
pos_start_query :
alignment_info_s
pos_start_ref :
alignment_info_s
positions :
score_array
- q -
q_intervals :
set_of_seqs_s
- r -
real_length :
sequence_s
ref_interval :
set_of_seqs_s
ref_seq :
set_of_seqs_s
- s -
scores :
score_array
seq :
interval_query_s
seqs :
sequence_array
sets_of_sequences :
matt_ygraph_s
size :
sequence_buffer_s
species :
sequence_s
strain :
sequence_s
strand :
interval_s
,
interval_query_s
,
sequence_s
strand_query :
alignment_info_s
strand_ref :
alignment_info_s
- t -
to :
sequence_s
Generated on Mon Sep 22 16:34:10 2008 for matt_ygraph by
1.5.5